In-app terminal not operable: cannot type in it, and Cmd+W closes the whole window instead of the terminal tab

[Broccolito]

Summary

The in-app terminal in the current version of the desktop app is effectively not operable. There are two problems, the second of which is dangerous:

1. Cannot type in the terminal

When the terminal is open, keyboard input does not reach it — the user cannot type anything into the terminal. This makes the feature non-functional in the first place.

2. Cmd+W closes the entire window instead of the focused terminal tab

With focus on the terminal:

• Ctrl+T / Cmd+T correctly opens a new task — that part works.
• Cmd+W, however, closes the entire app window instead of closing only the focused terminal tab/pane.

Expected behavior: when the terminal has focus, Cmd+W should close just the current terminal tab (like every terminal emulator and browser does), not tear down the whole window. Losing the entire session to a muscle-memory Cmd+W is a serious usability hazard.

Environment

• BioRouter desktop app, v1.88.3 (also observed on the current release line)
• macOS (Cmd+T / Cmd+W); the Ctrl+ variants apply on Windows/Linux

Likely relevant code

• ui/desktop/src/components/InAppTerminalDock.tsx — terminal dock, pane/tab management (closePane)
• ui/desktop/src/utils/terminalFocus.ts — terminal focus tracking
• ui/desktop/src/contexts/TerminalDockContext.tsx
• ui/desktop/src/main.ts — global Cmd+W / close-window IPC handling (around the "tabless route still closes on Cmd+W" comment); it does not appear to check whether the terminal has focus or whether a terminal tab could be closed instead