DESCRIPTION

Package: TissueMask
Type: Package
Title: Spatial Boundary Mask Fitting for Point Coordinate Data
Version: 0.1.0
Authors@R: person("Raredon Laboratory", role = c("aut", "cre"),
    email = "raredonlab@yale.edu")
Description: Fits polygon spatial masks to XY point coordinates such as
    cell centroids or transcript locations from spatial transcriptomics
    and spatial proteomics experiments. Supports four methods of
    increasing topological complexity: convex hull, concave hull, kernel
    density estimation (KDE), and a raster-based Gaussian smoothing
    approach that naturally handles internal voids (vessel lumens,
    necrotic cores, tissue tears) and disconnected tissue islands via
    GEOS polygon dissolve.
License: MIT + file LICENSE
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.3
Depends:
    R (>= 4.1.0)
Imports:
    sf (>= 1.0-0),
    stats,
    parallel
Suggests:
    concaveman,
    MASS,
    isoband,
    ggplot2,
    testthat (>= 3.0.0),
    knitr,
    rmarkdown,
    patchwork
VignetteBuilder: knitr
URL: https://raredonlab.github.io/TissueMask/, https://github.com/RaredonLab/TissueMask
BugReports: https://github.com/RaredonLab/TissueMask/issues
Config/testthat/edition: 3