TissueMask/_pkgdown.yml at dev · RaredonLab/TissueMask · GitHub

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url: https://raredonlab.github.io/TissueMask/

template:
  bootstrap: 5
  bootswatch: flatly
  bslib:
    primary: "#1a5fa8"
    link-color: "#1a5fa8"

home:
  title: "TissueMask — Spatial Boundary Mask Fitting"
  description: >
    Fit polygon spatial masks to XY point coordinate data from spatial
    transcriptomics and spatial proteomics experiments. Supports convex
    hull, concave hull, KDE, and raster-based methods with hole and island
    detection.
  links:
    - text: "RaredonLab on GitHub"
      href: https://github.com/RaredonLab
    - text: "TissueField (companion package)"
      href: https://github.com/RaredonLab/TissueField

navbar:
  structure:
    left:  [intro, reference, articles, news]
    right: [github]
  components:
    github:
      icon: fab fa-github fa-lg
      href: https://github.com/RaredonLab/TissueMask
      aria-label: GitHub

reference:
  - title: "Core function"
    desc: >
      The primary exported function for fitting spatial masks.
    contents:
      - fit_spatial_mask
  - title: "Package"
    desc: Package-level documentation.
    contents:
      - TissueMask-package

articles:
  - title: "Vignettes"
    navbar: Vignettes
    contents:
      - getting-started
      - advanced-topology
      - complete-reference

news:
  releases:
    - text: "TissueMask 0.1.0"
      href: https://github.com/RaredonLab/TissueMask/releases/tag/v0.1.0

footer:
  structure:
    left: developed_by
    right: built_with