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gnn_test.py
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from statistics import mean
from torch.distributions import Binomial
from pyscipopt import Model
from gnn_model.gnn_model import NeuralDiving
import torch
import argparse
import numpy as np
import random
from utils import extract_bigraph_from_mps
from feature import ObservationFunction
from environments import RootPrimalSearch as Environment
import json
from pyscipopt import SCIP_PARAMSETTING
import pickle
import time
def is_feasible(log_path):
log_file = open(log_path, "r", encoding='UTF-8')
lines = log_file.readlines() # 读取文件的所有行
assert len(lines) >= 0, '文件行数不足'
second_line = lines[1].split() # 获取第二行内容
if "failed" in second_line: # 判断第二行是否包含"fail"单词
return False
else:
return float(second_line[-1])
def get_primal_obj(filename, instance_file_type):
pb_model = Model()
pb_model.readProblem(f"{filename}.{instance_file_type}")
pb_model.setParam('limits/solutions', 1)
pb_model.optimize()
primal_bound = pb_model.getPrimalbound()
return primal_bound
if __name__ == '__main__':
random.seed(0)
np.random.seed(0)
torch.manual_seed(0)
device = torch.device("cuda:0" if torch.cuda.is_available() else "cpu")
parser = argparse.ArgumentParser()
parser.add_argument('--instance', type=str, default='SC', help='The instance for testing MIP, SC or CA, CF or IS')
parser.add_argument('--test_size', type=int, default=100, help='The number of instances')
parser.add_argument('--sample_nums', type=int, default=30, help='The number of instances')
parser.add_argument('--embedding_size', type=int, default=128, help='embedding size in gnn')
parser.add_argument('--gcn_layer_num', type=int, default=2, help='The number of layer in gnn')
parser.add_argument('--time_limit', type=int, default=1.1, help='The time of scip solving')
parser.add_argument('--coverage', type=float, default=0.2, help='')
parser.add_argument('--output_type', type=str, default='save', help='print or save')
args = parser.parse_args()
if args.instance == 'SC':
instance_file = '1_set_cover'
start = 900
instance_file_type = 'mps'
problem_type = 'min'
elif args.instance == 'CA':
instance_file = '2_combinatorial_auction'
start = 900
instance_file_type = 'mps'
problem_type = 'max'
elif args.instance == 'CF':
instance_file = '3_capacity_facility'
start = 900
instance_file_type = 'mps'
problem_type = 'min'
elif args.instance == 'IS':
instance_file = '4_independent_set'
start = 0
instance_file_type = 'mps'
problem_type = 'max'
var_nums = 1500
elif args.instance == 'SC_3000':
args.instance = 'SC'
instance_file = 'SC_3000'
start = 0
instance_file_type = 'mps'
problem_type = 'min'
elif args.instance == 'SC_4000':
args.instance = 'SC'
instance_file = 'SC_4000'
start = 0
instance_file_type = 'mps'
problem_type = 'min'
test_files = []
for i in range(args.test_size):
## test_files.append(f'instances/{instance_file}/test/{instance_file[2:]}_{start + i}')
test_files.append(f'instances/{instance_file}/set_cover_{start + i}')
observation_function = ObservationFunction()
env = Environment(observation_function=observation_function, presolve=True)
gnn_model = NeuralDiving(emb_size=args.embedding_size, gcn_mlp_layer_num=args.gcn_layer_num).to(device)
gnn_model.load_state_dict(torch.load(f'./gnn_model_hub/useSelectiveNet-True_C{args.coverage*100}_{args.instance}_Neural Diving_model_99.pkl', map_location=device))
times = []
obj_values = []
for i, filename in enumerate(test_files):
## extract feature
start = time.time()
bigraph = extract_bigraph_from_mps(filename, instance_file_type, observation_function, env)
bigraph = bigraph.to(device)
A = torch.sparse_coo_tensor(
bigraph.edge_index,
bigraph.edge_attr.squeeze(),
size=(bigraph.constraint_features.shape[0], bigraph.variable_features.shape[0]))
A = A.index_select(1, bigraph.int_indices)
b = bigraph.constraint_features[:, 0]
c = bigraph.variable_features[:, 0]
# get predict solution
gnn_model.eval()
mid0 = time.time()
output, select = gnn_model(
bigraph.constraint_features,
bigraph.edge_index,
bigraph.edge_attr,
bigraph.variable_features
)
initial_bound = json.load(open(f'{filename}.json', 'rb'))
mid1 = time.time()
observation_function = ObservationFunction()
env = Environment(time_limit=args.time_limit, observation_function=observation_function)
observation, action_set, reward, done, info = env.reset(filename + '.' + instance_file_type, \
objective_limit=initial_bound['primal_bound'])
action_set = torch.LongTensor(np.array(action_set, dtype=np.int64)).to(device)
m = env.model.as_pyscipopt()
output = output[action_set]
select = select[action_set]
mid2 = time.time()
# feasible_num = 0
# obj_values = []
problem_obj = []
for n in range(args.sample_nums):
p = Binomial(1, select)
probs = p.sample() * output
p = Binomial(1, output[probs > 0])
action = (action_set[probs > 0].cpu(), p.sample().cpu())
scip_model = Model()
# add the collected partial solutions to scip and optimize
scip_model.setParam('limits/time', args.time_limit)
scip_model.setParam('heuristics/completesol/maxunknownrate', 0.999)
scip_model.setParam('heuristics/completesol/solutions', 5)
# scip_model.setParam('limits/solutions', 5)
scip_model.setObjlimit(initial_bound['primal_bound'])
# scip_model.setParam('estimation/restarts/restartpolicy', 'n')
# scip_model.setParam('limits/maxorigsol', 1)
scip_model.setHeuristics(SCIP_PARAMSETTING.AGGRESSIVE)
log_path = f'GenMIP/agents/time_logs/neural_diving/{instance_file}/{args.instance}_gnn_{args.coverage}_instance{i}_num{n}.log'
scip_model.setLogfile(log_path)
scip_model.readProblem(filename + '.' + instance_file_type)
name_var_dict = {}
vars = m.getVars(transformed=True)
for v in scip_model.getVars(transformed=True):
name_var_dict[v.name] = v
s = scip_model.createPartialSol()
for j in range(len(action[0])):
scip_model.setSolVal(s, name_var_dict[vars[action[0][j]].name[2:]], action[1][j])
scip_model.addSol(s)
scip_model.hideOutput(quiet=True)
scip_model.optimize()
result = is_feasible(log_path)
if result != False:
problem_obj.append(result)
else:
problem_obj.append(np.nan)
##problem_values = np.array(problem_values)
end = time.time()
nan_count = np.isnan(problem_obj).sum()
print(f"instance {i}, feasible ratio: {(args.sample_nums-nan_count)/args.sample_nums}, obj value: {np.nanmean(problem_obj)}")
print(f"total time for 30 solutions:{mid1-start + end-mid2}, average time for each solution:{(mid1-start + end-mid2)/30}, average sample time: {(mid1-mid0)/30}")
obj_values.append(problem_obj)
times.append([mid0-start, mid1-mid0, end - mid2])
obj_values = np.array(obj_values)
time_values = np.array(times)
total_num = args.sample_nums * args.test_size
nan_count = np.isnan(obj_values).sum()
print(f"mean feasible ratio: {(total_num - nan_count)/total_num}, mean obj value: {np.nanmean(obj_values)}")
if args.output_type == 'save':
pickle.dump(obj_values, open(f'GenMIP/agents/time_results/neural_diving/{instance_file}/{args.instance}_gnn_{args.coverage}_obj.pkl', 'wb'))
pickle.dump(time_values, open(f'GenMIP/agents/time_results/neural_diving/{instance_file}/{args.instance}_gnn_{args.coverage}_time.pkl', 'wb'))