cwl-utils v0.10 ; license clarified (mostly Apache-2.0, some scripts GPL-3)

clarify licensing (#62) e3d45d5 @mr-c

Created example for importing CWL as an object into python c7308ef @alexiswl
Example of programmatic CWL creation 6519118 @mr-c

Switch to Github Actions b837e28 @mr-c
add executable bit to setup.py 3387a34 @mr-c
fix release test dc637b6 @mr-c
Update ruamel-yaml requirement ff225bb 9b004c1 ac013b5 @mr-c @dependabot
fix typo 3b05cc0 @KushalBeniwal
Upgrade to GitHub-native Dependabot 8dee31d @dependabot @mr-c
Bump mypy from 0.812 to 0.901 a077d43 @mr-c
requests type hints are now in a different package c7d7738 @mr-c
advertise that we include our own types b4b82b5 @mr-c
get ready for v0.10 release 1bfd7e2 @mr-c

cwl-utils 0.9 - Many parser & CWL expression tool fixes!

CWL tool to refactor expressions / interpolated parameter references

• Now exits 7 if only a single file is provided and it is unmodified (and other fixes) #42 @mr-c
• better escaping #47 @mr-c
• accept relative paths #48 @mr-c

CWL v1.x Parsers:

• CWL v1.2: pickValue & when (generic and in the CWL expr refactoring tool) #43 @mr-c
• fix for expanded syntax in id-like fields #51 #52 @tetron @mr-c

README freshen d1f1b0d @mr-c

cwl-util 0.8 -- major expression refactor tool refactoring

• fix errors in graph_split, added test @mr-c
• improve CLI for graph_split.py #38 by @altairwei
• clean up image pullers @mr-c
• update CWL v1.0, v1.1 and v1.2 parsers @mr-c
• docstring everywhere! @mr-c
• Added a CONTRIBUTING guide @mr-c

cwl-utils 0.7 - CWL v1.2 final + $schemas support

$schemas support is courtesy of @leipzig ; thanks!

cwl-utils 0.6

create codeseq analysis @mr-c
regenerate parsers (#26) @illusional
bump schema-salad version (to >=7 <8) @illusional

cwl-utils 0.4

• update v1.0 and v1.1 parsers with optional field support (#15 @illusional)
• freshen testing setup (@mr-c)

cwl-utils 0.3

add v1.1 parser @mr-c
add script to replace ExpressionTools with CommandLineTools @mr-c

cwl-utils 0.2

new utility: graph_split.py (a $graph splitter) @mr-c
docker_extract.py:
Allow to pull images with Singularity #4 @khillion
Support both Singularity 2.6.1 and 3.x
image_puller.py: Change replace charcter #9 @manabuishii

hello world

0.1

add some basic tests