PRISM/.github/workflows/deploy.yml at main · hackbio-ca/PRISM · GitHub

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name: Deploy to AWS ECS

on:
  push:
    branches: [ main, interface ]
    paths:
      - 'interface/backend/**'
      - 'Dockerfile'
      - '.github/workflows/**'

  # Allow manual triggering
  workflow_dispatch:

env:
  AWS_REGION: us-east-1
  ECR_REPOSITORY: bioinfo/repo
  ECS_SERVICE: prism-api-service-0u9t6ggt
  ECS_CLUSTER: bioinfo-cluster
  ECS_TASK_DEFINITION: prism-api
  CONTAINER_NAME: prism-container

jobs:
  deploy:
    name: Deploy to ECS
    runs-on: ubuntu-latest

    steps:
    - name: Checkout code
      uses: actions/checkout@v4

    - name: Configure AWS credentials
      uses: aws-actions/configure-aws-credentials@v4
      with:
        aws-access-key-id: ${{ secrets.AWS_ACCESS_KEY_ID }}
        aws-secret-access-key: ${{ secrets.AWS_SECRET_ACCESS_KEY }}
        aws-session-token: ${{ secrets.AWS_SESSION_TOKEN }}
        aws-region: ${{ env.AWS_REGION }}

    - name: Login to Amazon ECR
      id: login-ecr
      uses: aws-actions/amazon-ecr-login@v2

    - name: Set up Docker Buildx
      uses: docker/setup-buildx-action@v3

    - name: Build, tag, and push image to Amazon ECR
      id: build-image
      env:
        ECR_REGISTRY: ${{ steps.login-ecr.outputs.registry }}
        IMAGE_TAG: ${{ github.sha }}
      run: |
        # Build Docker image for x86_64 (ECS Fargate compatibility)
        docker buildx build \
          --platform linux/amd64 \
          --tag $ECR_REGISTRY/$ECR_REPOSITORY:$IMAGE_TAG \
          --tag $ECR_REGISTRY/$ECR_REPOSITORY:latest \
          --push .

        echo "image=$ECR_REGISTRY/$ECR_REPOSITORY:$IMAGE_TAG" >> $GITHUB_OUTPUT

    - name: Download task definition
      run: |
        aws ecs describe-task-definition \
          --task-definition $ECS_TASK_DEFINITION \
          --query taskDefinition > task-definition-raw.json

        # Clean task definition by removing unsupported fields for GitHub Actions
        jq 'del(.enableFaultInjection, .taskDefinitionArn, .revision, .status, .requiresCompatibilities, .placementConstraints, .compatibilities, .registeredAt, .registeredBy)' \
          task-definition-raw.json > task-definition.json

    - name: Fill in the new image ID in the Amazon ECS task definition
      id: task-def
      uses: aws-actions/amazon-ecs-render-task-definition@v1
      with:
        task-definition: task-definition.json
        container-name: ${{ env.CONTAINER_NAME }}
        image: ${{ steps.build-image.outputs.image }}

    - name: Deploy Amazon ECS task definition
      uses: aws-actions/amazon-ecs-deploy-task-definition@v1
      with:
        task-definition: ${{ steps.task-def.outputs.task-definition }}
        service: ${{ env.ECS_SERVICE }}
        cluster: ${{ env.ECS_CLUSTER }}
        wait-for-service-stability: true

    - name: Service deployment summary
      run: |
        echo "🚀 Deployment successful!"
        echo "📦 Image: ${{ steps.build-image.outputs.image }}"
        echo "🎯 Service: ${{ env.ECS_SERVICE }}"
        echo "🔗 Check your ALB URL for the updated API"