merge the lncpipe:dev to original LncPipe:dev #36 #37
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Adding the necessary github files
the pipeline now reads a samplesheet!
added structure based on old pipeline
added backbone
backbone added 1
STAR running and whole pipeline completing successfully :)
stringtie subworkflow and gffcompare. Went through extensive testing by @ctuni
Added subread_featurecounts and htseq modules
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