* Create release pipelines for nf-python

* Bump version to 0.1.1

Author: royjacobson

.github/workflows/nextflow-plugin.yml

@@ -10,7 +10,7 @@ jobs:
   build:
     runs-on: ubuntu-latest
     env:
-      NF_PYTHON_VERSION: '0.0.1'
+      NF_PYTHON_VERSION: '0.1.1'
       NXF_OFFLINE: 'true'
     steps:
     - uses: actions/checkout@v4

.github/workflows/plugin-release.yml

@@ -1,6 +1,6 @@
 # CI pipeline for nf-python
 
-name: nf-python Release
+name: plugin Release
 
 on:
   push:
@@ -49,3 +49,48 @@ jobs:
         with:
           name: nf-python-plugin
           path: build/plugins/nf-python-*.zip
+
+  release:
+    needs: build-plugin
+    runs-on: ubuntu-latest
+    permissions:
+      contents: write
+    steps:
+      - uses: actions/checkout@v4
+      - name: Download plugin artifact
+        uses: actions/download-artifact@v4
+        with:
+          name: nf-python-plugin
+          path: build/plugins/
+      - name: Get release info
+        id: get_release
+        uses: actions/github-script@v7
+        with:
+          script: |
+            const tag = process.env.GITHUB_REF.split('/').pop();
+            const releases = await github.rest.repos.listReleases({
+              owner: context.repo.owner,
+              repo: context.repo.repo
+            });
+            let release = releases.data.find(r => r.tag_name === tag);
+            if (!release) {
+              core.setFailed(`No release found for tag ${tag}. Please create a release first.`);
+              return;
+            }
+            core.setOutput('upload_url', release.upload_url);
+      - name: Find plugin zip
+        id: find_zip
+        run: |
+          file=$(ls build/plugins/nf-python-*.zip | head -n1)
+          filename=$(basename $file)
+          echo "file=$file" >> $GITHUB_OUTPUT
+          echo "filename=$filename" >> $GITHUB_OUTPUT
+      - name: Upload plugin zip to release
+        uses: actions/upload-release-asset@v1
+        env:
+          GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
+        with:
+          upload_url: ${{ steps.get_release.outputs.upload_url }}
+          asset_path: ${{ steps.find_zip.outputs.file }}
+          asset_name: ${{ steps.find_zip.outputs.filename }}
+          asset_content_type: application/zip

.github/workflows/pypi-release.yml

@@ -50,30 +50,23 @@ jobs:
       - name: Archive Python dist
         uses: actions/upload-artifact@v4
         with:
-          name: nf-python-pypi
+          name: python-package-distributions
           path: py/dist/*
 
   publish-pypi:
     needs: build-pypi
     runs-on: ubuntu-latest
     environment:
       name: pypi-publish
-      url: https://pypi.org/project/nf-python-plugin/
+      url: https://pypi.org/p/nf-python-plugin/
     permissions:
-      id-token: write  # Required for trusted publishing
+      id-token: write
+    
     steps:
-      - uses: actions/checkout@v4
-      - name: Set up Python
-        uses: actions/setup-python@v5
-        with:
-          python-version: '3.9'
-      - name: Build Python package
-        run: |
-          cd py
-          pip install build
-          python -m build
-      - name: Publish to PyPI (trusted publishing)
-        uses: pypa/gh-action-pypi-publish@release/v1
-        with:
-          # No password needed for trusted publishing
-          verbose: true
+    - name: Download all the dists
+      uses: actions/download-artifact@v4
+      with:
+        name: python-package-distributions
+        path: dist/
+    - name: Publish distribution 📦 to PyPI
+      uses: pypa/gh-action-pypi-publish@release/v1

plugins/nf-python/src/resources/META-INF/MANIFEST.MF

@@ -1,6 +1,6 @@
 Manifest-Version: 1.0
 Plugin-Id: nf-python
-Plugin-Version: 0.0.1
+Plugin-Version: 0.1.1
 Plugin-Class: nextflow.python.PythonPlugin
 Plugin-Provider: nextflow
 Plugin-Requires: >=22.04.0

py/pyproject.toml

@@ -1,6 +1,6 @@
 [project]
-name = "nf-python"
-version = "0.0.1"
+name = "nf-python-plugin"
+version = "0.1.1"
 authors = [
   { name="Roy Jacobson", email="[email protected]" },
 ]