plotPSMC.csv

#PathToPSMCfile GenerationTime MutationRate BinSize SampleName Color(unnecessary but recomended, a random one will be generated)
#./90French10Altai_sorted.psmc 25 2.5e-8 100 French cyan
#./Dai_upper.psmc 25 2.5e-8 100 Dai
#./Yoruba_upper.psmc 25 2.5e-8 100 Yoruba purple
#./Vi33_25_neanderthal.psmc 25 2.5e-8 100 Neanderthal orange
#./papio_file_InitUnfilt_Combined_80BSrounds.psmc 11 0.9e-8 100 "P.papio_unfiltered" "cyan"
./papio_file_InitFilt_Combined_80BSrounds.psmc 11 0.9e-8 100 "P.papio_filtered" "green"
#"./TEST_InitFilt_combineBootstrap1-10.psmc" 10 0.9e-8 100 "P.papio" "red"
./file_test1_combined.psmc 15 1.8e-8 100 Chimpanzee black
#./file_rc_CB10_combined.psmc 7 0.9e-8 100 RC_CI_vsBWC yellow
./file_CB10_RC_CI_RefSeq-Mmul_trimReads_combined.psmc 7 0.9e-8 100 RC_CI_vsMm orange
#./file_CB10_RC_CI_RefSeq-Panu_trimReads_combined.psmc 7 0.9e-8 100 RC_CI_vsPanu red
#./file_T29_RC_GB_combined.psmc 7 0.9e-8 100 RC_GB_vsBWC blue
./file_T29_RC_GB_RefSeq-Mmul_combined.psmc 7 0.9e-8 100 RC_GB_vsMm red
#./file_T29_RC_GB_RefSeq-Panu_trimReads_combined.psmc 7 0.9e-8 100 RC_GB_vsPanu black
#./file_rmdupMOS.bam_BWC_.psmc 7 0.9e-8 100 BWC_CI_vsBWC black
./file_CP8_BWC_Tai_RefSeq-Mmul_trimReads_combined.psmc 7 0.9e-8 100 BWC_CI_vsMm blue
#./file_T31_bwc_gb_combined.psmc 7 0.9e-8 100 BWC_GB_vsBWC blue
./file_T31_BWC_GB_RefSeq-Mmul_trimReads_combined.psmc 7 0.9e-8 100 BWC_GB_vsMm cyan
#./file_T31BWCGB-refseqPanu_trimReads_combined.psmc 7 0.9e-8 100 BWC_GB_vsPanu orange