The final project of Yishaia Zabary -
Is the process of platelets creating a plug to block wound bleeding.
data was obtained via WIS (Weizzman Institute of Science) and consists of 27 stacks of images bound by time.
the project contains many exploratory jupyter notebooks. they implement many methods of data plotting and exploration and are meant for fast data observence.
contain only proven methods that produce meaningful results and plots.
python interperter version - 3.7
libraries&packeges - @see 'requirements.txt'
ffmpeg - your system must have ffmpeg installed, ffmpeg is a c-system library, for audio and video decoding/encoding.
ImageJ & FIJI (Fiji is just ImageJ) - ImageJ is a c library to process and analyze (mainly) biological visual data (images&is video).
FIJI is the main tool we use in order to pre-process our dataset, cropping, manipulating and more.