CCRSF-IFX
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SF_Fastq-QC
SF_Fastq-QC PublicFastq QC pipeline for fast project delivery, also called "nopipe".
Python 1
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SF_LR_Transcriptome
SF_LR_Transcriptome PublicLong read transcriptome pipeline for Pacbio and ONT
Python 1
Repositories
- SF_sc-smk-wl Public
CCRSF-IFX/SF_sc-smk-wl’s past year of commit activity - SF_biocontainer Public
CCRSF-IFX/SF_biocontainer’s past year of commit activity - scRNA_pipeline Public Forked from abcsFrederick/scRNA_pipeline
Single Cell RNA-seq Analysis Pipeline
CCRSF-IFX/scRNA_pipeline’s past year of commit activity - NGS_SV_CNV_Pipeline Public Forked from abcsFrederick/NGS_SV_CNV_Pipeline
Genome Structural Variants Detection and Annotation Pipeline. Functions include NGS data QC, both germline and somatic SVs and CNVs detections, SVs and CNVs annotation and visualization.
CCRSF-IFX/NGS_SV_CNV_Pipeline’s past year of commit activity - methXsort Public
methXsort: Sorting Bisulfite- or Enzymatic-converted Reads in Xenograft Experiments
CCRSF-IFX/methXsort’s past year of commit activity - scMaestro Public
scMaestro: end-to-end single-cell data analysis workflow with Snakemake and Singularity.
CCRSF-IFX/scMaestro’s past year of commit activity - SF_LR_scRNA Public
CCRSF-IFX/SF_LR_scRNA’s past year of commit activity - SF_Downstream_RNA-seq Public
RNA-Seq Downstream Differential Gene Expression and Gene Set Enrichment Analysis
CCRSF-IFX/SF_Downstream_RNA-seq’s past year of commit activity
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