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@MICA-MNI

MICA-MNI

Multimodal Imaging and Conenctome Analysis Lab at the Montreal Neurological Institute.

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  1. BrainSpace BrainSpace Public

    BrainSpace is an open-access toolbox that allows for the identification and analysis of gradients from neuroimaging and connectomics datasets | available in both Python and Matlab |

    Python 237 81

  2. BrainStat BrainStat Public

    A statistics and context decoding toolbox for neuroimaging.

    Jupyter Notebook 111 25

  3. ENIGMA ENIGMA Public

    The ENIGMA Toolbox is an open-source repository for accessing 100+ ENIGMA statistical maps, visualizing cortical and subcortical surface data, and relating neuroimaging findings to micro- and macro…

    Python 167 42

  4. micaopen micaopen Public

    Open Scripts and pipelines from the Multimodal Imaging and Connectome Analysis Lab at the Montreal Neurological Institute

    Jupyter Notebook 81 43

  5. micapipe micapipe Public

    micapipe from the Multimodal imaging and connectome analysis lab (http://mica-mni.github.io) at the Montreal Neurological Institute. Read The Docs documentation below

    Shell 112 39

  6. z-brains z-brains Public

    z-brains: open software for brain lesion lateralization and localization

    Python 12 6

Repositories

Showing 10 of 30 repositories
  • micapipe Public

    micapipe from the Multimodal imaging and connectome analysis lab (http://mica-mni.github.io) at the Montreal Neurological Institute. Read The Docs documentation below

    MICA-MNI/micapipe’s past year of commit activity
    Shell 112 GPL-3.0 39 41 (3 issues need help) 8 Updated Nov 6, 2025
  • z-brains Public

    z-brains: open software for brain lesion lateralization and localization

    MICA-MNI/z-brains’s past year of commit activity
    Python 12 BSD-3-Clause 6 9 0 Updated Nov 4, 2025
  • micaflow Public

    The easy way to process MRI data

    MICA-MNI/micaflow’s past year of commit activity
    Python 1 0 1 0 Updated Nov 3, 2025
  • MICA-MNI/MICA-MNI.github.io’s past year of commit activity
    HTML 1 CC0-1.0 0 0 0 Updated Nov 2, 2025
  • LAMAReg Public

    Label Augmented Modality Agnostic Registration (LAMAReg) is a MRI resgistration technique combines deep learning-based segmentation and numerical solutions to generate precise non linear warpfields

    MICA-MNI/LAMAReg’s past year of commit activity
    Python 7 MIT 2 6 1 Updated Oct 30, 2025
  • BrainSpace Public

    BrainSpace is an open-access toolbox that allows for the identification and analysis of gradients from neuroimaging and connectomics datasets | available in both Python and Matlab |

    MICA-MNI/BrainSpace’s past year of commit activity
    Python 237 BSD-3-Clause 81 9 4 Updated Oct 29, 2025
  • 2025_in-vivo_tauPET-mk6240_TLE Public

    This repository provides code for analyzing in-vivo tau aggregation in temporal lobe epilepsy (TLE) using 18F-MK6240 PET. It includes preprocessing, statistical analysis, and visualization scripts to assess tau deposition, connectivity patterns, and cognitive associations in TLE patients and controls.

    MICA-MNI/2025_in-vivo_tauPET-mk6240_TLE’s past year of commit activity
    Jupyter Notebook 3 MIT 0 1 0 Updated Oct 3, 2025
  • MICA-7t Public

    scripts for 7t sorting and organizing

    MICA-MNI/MICA-7t’s past year of commit activity
    Shell 8 GPL-3.0 0 0 0 Updated Sep 10, 2025
  • endex-epilepsy.github.io Public

    Epilepsy Neuroimaging Data Exchange

    MICA-MNI/endex-epilepsy.github.io’s past year of commit activity
    HTML 0 BSD-2-Clause 0 0 0 Updated Jul 26, 2025
  • ENIGMA Public

    The ENIGMA Toolbox is an open-source repository for accessing 100+ ENIGMA statistical maps, visualizing cortical and subcortical surface data, and relating neuroimaging findings to micro- and macroscale brain organization. 🤠

    MICA-MNI/ENIGMA’s past year of commit activity
    Python 167 BSD-3-Clause 42 9 1 Updated Jul 14, 2025

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