update systems and components docs for completeness

[atravitz]

I noticed we don't have all relevant components in the api docs, so I added them here.

Might help with #1933

Checklist

• All new code is appropriately documented (user-facing code must have complete docstrings).
• Added a news entry, or the changes are not user-facing.
• Ran pre-commit: you can run pre-commit locally or comment on this PR with pre-commit.ci autofix.

Manual Tests: these are slow so don't need to be run every commit, only before merging and when relevant changes are made (generally at reviewer-discretion).

• GPU integration tests
• example notebook testing
• packaging tests: run this for any large feature PRs or PRs that add test data.

Developers certificate of origin

• I certify that this contribution is covered by the MIT License here and the Developer Certificate of Origin at https://developercertificate.org/.

[codecov]

Codecov Report

✅ All modified and coverable lines are covered by tests.
✅ Project coverage is 90.51%. Comparing base (7959cc6) to head (e9388bf).

Additional details and impacted files

@@            Coverage Diff             @@
##             main    #1954      +/-   ##
==========================================
- Coverage   94.78%   90.51%   -4.28%     
==========================================
  Files         210      210              
  Lines       18841    18841              
==========================================
- Hits        17859    17054     -805     
- Misses        982     1787     +805     

Flag	Coverage Δ
fast-tests	90.51% <ø> (?)
slow-tests	?

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[hannahbaumann]

Thanks @atravitz , lgtm! Just the one comment!

[hannahbaumann]

We should probably also add SolvatedPDBComponent here.

[atravitz]

SolvatedPDBComponent is only in gufe, and hasn't been explicitly exposed as openfe.SolvatedPDBComponent. Do you think it would be useful to be user-facing, or keep it in gufe as developer-facing-only?

[atravitz]

note: I've added openfe.SolvatedPDBComponent since I we are referencing it in #1933, which makes it inherently user-facing. Let me know if you disagree!

[github-actions]

No API break detected ✅