Patch to include psutil as dependency - #76

Merged

drowenhorst-nrl merged 105 commits into

USNavalResearchLaboratory:mainfrom

drowenhorst-nrl:develop

Jan 27, 2026

Commits on Oct 17, 2024

Initial attempt at including diffusion
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a8334f8

Commits on Oct 22, 2024

First attempt to add a scale bar to ipf images
drowenhorst-nrl
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6854fbf
Set diffusion offset to be a scalar added to the center weighted kernel.
drowenhorst-nrl
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4b800c0
Include basic font in manifest
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983e43b

Commits on Oct 23, 2024

Attempt to fix manifest
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bb4a0c6
Some improvements to scalebar attachment.
drowenhorst-nrl
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dff1e36

Commits on Oct 29, 2024

Another code rearrangement and some documentation.
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0eae939
Change behavior for norescale if no scale bar.
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447621b

Commits on Oct 30, 2024

Added grayscale option to IPF maps.
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00f2977
More pleasing contrast for fitinv.
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628cbf4
Clean up some code.
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52fb338

Commits on Oct 31, 2024

Changed upscale_xsize --> zoom_xsize. Added zoom_kwargs.
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7fc579d
Refactor to micronbar to avoid confusion with matplotlib_scalebar package.
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8bbf4c3
Fix PQ
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55e2165
Updated CL programs for new PQ metric.
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94c60a0
Try and correct a rare divide by 0
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c694835

Commits on Nov 1, 2024

Fix bandindex arrays
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1e01ab1
Improved QUEST weighting.
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51a8839
Gamma function for images.
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b92c26e
More consistent scaling for PQ value.
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3217f22
Better automated CPU allocation.
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6d5168c

Commits on Nov 4, 2024

Commits on Nov 5, 2024

Fixed array slicing on CPU band detection.
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a4e11dd
Fixed keeping pattern mask with indexer object.
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eb8055d

Commits on Nov 27, 2024

Start Adding DM5 file type.
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c3c68f0

Commits on Dec 5, 2024

Fix numba typing error
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f812300
Merge branch 'develop' into nlstem
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6bbd3b7

Commits on Dec 6, 2024

Suppress bogus warnings on NVIDIA Opencl
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3d50614
Fix for Windows needing integer valued font size.
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dd4c02b
Keep from resetting warnings
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0cc0088

Commits on Dec 9, 2024

Commits on Dec 12, 2024

First attempt at NLPAR for 4D STEM.
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2d4f7e1

Commits on Dec 13, 2024

Commits on Feb 3, 2025

Merge branch 'develop' into nlstem
drowenhorst-nrl
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a65a1ae
Update tests to oldest python 3.8
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96e674f

Commits on Feb 6, 2025

Added SpaceGroupNumber to oh5 metadata
drowenhorst-nrl
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5236216
Add helper functions for when no opencl is found.
drowenhorst-nrl
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6e4e850
Update tests to oldest python 3.8
drowenhorst-nrl
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2b4c398
Added SpaceGroupNumber to oh5 metadata
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bbe3f62
Merge branch 'develop' into nlstem
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821778c

Commits on Apr 1, 2025

Merge branch 'develop' into nlstem
drowenhorst-nrl
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434a075

Commits on Apr 10, 2025

Slightly improved error handling if things go very wrong.
drowenhorst-nrl
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30b05f1

Commits on May 16, 2025

Preliminary support for version 6 ebsp files.
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d98155d

Commits on Jul 21, 2025

Allow for PC to be an array of values, one for each pattern to be indexed.
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a695fbf

Commits on Aug 4, 2025

Set up kernel object reuse - should be more efficient, and eliminate warnings
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d9e7d94

Commits on Aug 12, 2025

Bump actions/checkout from 4 to 5
dependabot[bot]
authored
111d5c8

Commits on Sep 8, 2025

Bump actions/setup-python from 5 to 6
dependabot[bot]
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531cd43

Commits on Oct 1, 2025

Commits on Oct 2, 2025

Fixed issue that prevented autonlpar from using user defined lambda.
drowenhorst-nrl
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c78cd0c

Commits on Oct 10, 2025

Fixed bug in reading step size in ebsp files.
drowenhorst-nrl
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ce26c29

Commits on Nov 18, 2025

Merge develop
Dave Rowenhorst
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9432a49
Include helper functions
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29793d5
Finish merge with develop
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2c6db69

Commits on Nov 19, 2025

Begin block cpu NLPAR
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a0c43d2
Continuing interrupted merge from develop
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7e9ff54
calcnlpar_cpu now block chunked
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5838a53
Check point
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466c998

Commits on Nov 20, 2025

Moved sigma calculation (and also lambda optimization) to block-based chunks vs. row based.
Dave Rowenhorst
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b815dd3

Commits on Nov 21, 2025

Merge branch 'blocknlpar' into mergenlstemblock
Dave Rowenhorst
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0c28b0d
More consistent return format.
Dave Rowenhorst
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f6ba08d
Merge branch 'blocknlpar' into mergenlstemblock
Dave Rowenhorst
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a2ebca4

Commits on Nov 24, 2025

Bump actions/checkout from 5 to 6
dependabot[bot]
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9e5e4a5
Adjusted stem_scale scaling to sqrt() [not log()]. Corrected method inheritance issues.
Dave Rowenhorst
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37b9d38
Decide on best NLPAR version on import.
Dave Rowenhorst
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52a63c8
Better flexibility on choosing NLPAR implementation.
Dave Rowenhorst
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9c9b9b4

Commits on Nov 25, 2025

Checkpoint
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deb7eda
Checkpoint
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3d48e9e
Checkpoint
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678fbf5

Commits on Nov 26, 2025

Checkpoint
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1420226
Checkpoint
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cb9786c

Commits on Dec 2, 2025

Removed alternate sigma calculation. That effort is stored on NLPAR2 branch.
Dave Rowenhorst
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ad1b273

Commits on Dec 4, 2025

Significant code clean-up, removing redundant keywords within NLPAR.
Dave Rowenhorst
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2bc4ef2
Merge branch 'mergenlstemblock' into blocknlpar
Dave Rowenhorst
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d058421
Merge branch 'mergenlstemblock' into develop
Dave Rowenhorst
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7a31b76

Commits on Dec 5, 2025

First steps to numba parallel
Dave Rowenhorst
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ddc1bb1

Commits on Dec 6, 2025

Appears to be working - numba multi-threading
Dave Rowenhorst
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7dfede4
Checkpoint
drowenhorst-nrl
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c442571
Checkpoint
drowenhorst-nrl
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b68fb39

Commits on Dec 8, 2025

Adjust multiprocessor settings. Add addphaselist method.
drowenhorst-nrl
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2e63e46
SubPrograms in triplevote to assist numba parallel.
Dave Rowenhorst
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5e3e1d3
Changing multiprocessing optimal values for number of indexing processes.
Dave Rowenhorst
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46460fe
Upped max number of patterns per chunk in distributed indexing.
Dave Rowenhorst
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f455481

Commits on Dec 9, 2025

More scheduling adjustments.
Dave Rowenhorst
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ff6a060

Commits on Dec 11, 2025

Final performance tweaking ... for now.
Dave Rowenhorst
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51c394c
removed unused attribute phaseName (was actually using phasename)
Dave Rowenhorst
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b0ed820
Beginning of a pyebsdindex save/restore.
Dave Rowenhorst
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5438f56

Commits on Dec 12, 2025

First attempt at a indexer file save.
Dave Rowenhorst
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1d919e8

Commits on Jan 26, 2026

Small bug fixes to allow for saving indexer object in an HDF5
Dave Rowenhorst
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79688ef
Prepare for 0.3.9 release
drowenhorst-nrl
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f8299d8

Commits on Jan 27, 2026

Need to include psutil as dependency.
drowenhorst-nrl
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7403b4d
Merge branch 'main' into develop
drowenhorst-nrl
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688375e