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Request for H&E images paired with GSE311609 Xenium data

Status: Open.

#111 In bdsc-tds/xenium_analysis_pipeline;

· jinxixiang opened on May 3, 2026

Missing donor-specific tumor cells in the matched reference

Status: Open.

#107 In bdsc-tds/xenium_analysis_pipeline;

· mariiabilous opened on Feb 13, 2026

Xenium segmentation integration with QuPath notebook

Status: Open.

#106 In bdsc-tds/xenium_analysis_pipeline;

· kbruton opened on Feb 12, 2026

add cell2location as deconvolution method

Status: Open.

Feature

#99 In bdsc-tds/xenium_analysis_pipeline;

· jlr13 opened on Dec 15, 2025

Output metadata along with UMAP

Status: Open.

#98 In bdsc-tds/xenium_analysis_pipeline;

· mariiabilous opened on Dec 15, 2025

shape statistics

Status: Open.

#95 In bdsc-tds/xenium_analysis_pipeline;

· estellad opened on Dec 12, 2025