Add rakaia #19
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federicomarini
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federicomarini
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Thanks! I am doing a slight edit to highlight the nice manuscript you have out!
README.md
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| - [ProteinPaint](https://proteinpaint.stjude.org/examples/), some general info are here: https://www.stjude.org/research/shared-resources/technology-licensing/technologies/proteinpaint-web-application-for-visualizing-genomic-data-sj-15-0021.html, original publication here: https://www.nature.com/articles/ng.3466. Used e.g. to deploy Mouse Retina Development data, https://proteinpaint.stjude.org/F/mm10/2019.mouse.retina.scRNA.html | ||
| - [ProTrack](http://ccrcc.cptac-data-view.org), an interactive multiomics data browser for proteogenomic projects - described in the preprint https://doi.org/10.1101/2020.02.05.935650. Source code is (should be) available at https://github.com/WangLab/ProTrack-ccrcc (currently not found?) | ||
| - [puma_gtex](https://kuijjer.shinyapps.io/puma_gtex/), a browser for exploring tissue-specific functions of miRNAs (as described in the PUMA preprint, https://www.biorxiv.org/content/10.1101/2019.12.18.874065v1) | ||
| - [rakaia](https://rakaia.io/): Scalable in-browser expression analysis of spatial data types, https://github.com/camlab-bioml/rakaia |
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I am adding directly the info on the current version of the preprint!
federicomarini
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Oct 28, 2025
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