Skip to content
Open
Show file tree
Hide file tree
Changes from all commits
Commits
File filter

Filter by extension

Filter by extension

Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
22 changes: 18 additions & 4 deletions README.Rmd
Original file line number Diff line number Diff line change
Expand Up @@ -19,14 +19,28 @@ knitr::opts_chunk$set(
[![Lifecycle: experimental](https://img.shields.io/badge/lifecycle-experimental-orange.svg)](https://lifecycle.r-lib.org/articles/stages.html#experimental)
<!-- badges: end -->

`drmr` (pronounced _drummer_) is an `R` package for fitting dynamic range
models. Inference is carried out in a Bayesian framework via Markov Chain Monte
Carlo (MCMC) samples available in `Stan`.
`drmr` (pronounced *drummer*) is an `R` package for fitting dynamic range models
to spatiotemporal data on species abundance. Dynamic range models are spatial
population models in which demographic rates (e.g., reproduction or mortality)
are influenced by the environment. Inference is carried out in a Bayesian
framework via Markov Chain Monte Carlo (MCMC) samples available in `Stan`.

For details, please see Vignettes linked below and [da Cunha Godoy et
al. 2026](https://ecoevorxiv.org/repository/view/12564/).

### Installation

The installation of the development version from GitHub can be done via
```r

``` r
remotes::install_github("pinskylab/drmr")
## or devtools::install_github("pinskylab/drmr")
```
### Vignettes

* [Get started](https://pinskylab.github.io/drmr/articles/get-started.html)
* [Theoretical background](https://pinskylab.github.io/drmr/articles/theory.html)
* [Algorithms](https://pinskylab.github.io/drmr/articles/algos.html)
* [Initializing densities](https://pinskylab.github.io/drmr/articles/init.html)
* [Parameterization of the density functions](https://pinskylab.github.io/drmr/articles/parametrization.html)
* [Advanced features](https://pinskylab.github.io/drmr/articles/advanced-features.html)
24 changes: 22 additions & 2 deletions README.md
Original file line number Diff line number Diff line change
Expand Up @@ -9,8 +9,14 @@ experimental](https://img.shields.io/badge/lifecycle-experimental-orange.svg)](h
<!-- badges: end -->

`drmr` (pronounced *drummer*) is an `R` package for fitting dynamic
range models. Inference is carried out in a Bayesian framework via
Markov Chain Monte Carlo (MCMC) samples available in `Stan`.
range models to spatiotemporal data on species abundance. Dynamic range
models are spatial population models in which demographic rates (e.g.,
reproduction or mortality) are influenced by the environment. Inference
is carried out in a Bayesian framework via Markov Chain Monte Carlo
(MCMC) samples available in `Stan`.

For details, please see Vignettes linked below and [da Cunha Godoy et
al. 2026](https://ecoevorxiv.org/repository/view/12564/).

### Installation

Expand All @@ -20,3 +26,17 @@ The installation of the development version from GitHub can be done via
remotes::install_github("pinskylab/drmr")
## or devtools::install_github("pinskylab/drmr")
```

### Vignettes

- [Get
started](https://pinskylab.github.io/drmr/articles/get-started.html)
- [Theoretical
background](https://pinskylab.github.io/drmr/articles/theory.html)
- [Algorithms](https://pinskylab.github.io/drmr/articles/algos.html)
- [Initializing
densities](https://pinskylab.github.io/drmr/articles/init.html)
- [Parameterization of the density
functions](https://pinskylab.github.io/drmr/articles/parametrization.html)
- [Advanced
features](https://pinskylab.github.io/drmr/articles/advanced-features.html)
Loading