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b907554
feat: `AnnData.can_write` based on `AnnData.fold`
ilan-gold Mar 19, 2026
19daed5
chore: docs
ilan-gold Mar 19, 2026
4125375
refactor: use accessors
ilan-gold Mar 19, 2026
8be5ba2
fix: DFS order + fixes
ilan-gold Mar 19, 2026
0f4d1b0
chore: add test for `uns`
ilan-gold Mar 19, 2026
be98d32
fix!: remove `__delitem__` and `__setitem__` from the `AnnData` objec…
ilan-gold Mar 23, 2026
9338baa
Merge branch 'main' into ig/fold_can_write
ilan-gold Mar 23, 2026
fbc696f
chore!: remove `AnnData.concatenate` (#2370)
ilan-gold Mar 23, 2026
69daf90
feat: `raw` + `uns` traversal
ilan-gold Mar 23, 2026
932d766
fix: `fold` -> `reduce`
ilan-gold Mar 23, 2026
e0f3ee2
chore: docs
ilan-gold Mar 23, 2026
436fc68
Merge branch 'main' into ig/fold_can_write
ilan-gold Mar 23, 2026
ee04741
fix: `meth` not `func`
ilan-gold Mar 23, 2026
6d6f454
fix: `fold` not `reduce` in relnote
ilan-gold Mar 23, 2026
1f77a4c
fix: nested
ilan-gold Mar 23, 2026
91adffe
chore: more `func` clarification
ilan-gold Mar 23, 2026
928b72a
fix: link
ilan-gold Mar 23, 2026
19a915d
fix: link
ilan-gold Mar 23, 2026
c0886fe
refactor: simpler
ilan-gold Mar 23, 2026
6cffc05
fix: relnote number
ilan-gold Mar 23, 2026
4de5eac
Merge remote-tracking branch 'origin/ig/fold_can_write' into html_rep
katosh Mar 23, 2026
b8dfaea
refactor: use AnnData.reduce() for HTML repr section traversal
katosh Mar 23, 2026
5c31253
fix: LayerAcc children incorrectly detected as section visits
katosh Mar 23, 2026
eb84064
fix: remove redundant tooltip override in _finalize_section
katosh Mar 24, 2026
aa67cf2
Merge branch 'html_rep' into html_rep_reduce
katosh Mar 25, 2026
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2 changes: 1 addition & 1 deletion .github/workflows/check-pr.yml
Original file line number Diff line number Diff line change
Expand Up @@ -63,7 +63,7 @@ jobs:
id: changes
with:
filters: | # this is intentionally a string
relnotes: 'docs/release-notes/${{ github.event.pull_request.number }}.${{ needs.check-milestone.outputs.type }}.md'
relnotes: 'docs/release-notes/${{ github.event.pull_request.number }}.${{ (contains(github.event.pull_request.title, '!') && 'breaking') || needs.check-milestone.outputs.type }}.md'
- name: Check if a relevant release fragment is added
uses: flying-sheep/check@v1
with:
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7 changes: 7 additions & 0 deletions docs/api.md
Original file line number Diff line number Diff line change
Expand Up @@ -264,6 +264,13 @@ Types used by the former:
abc.CSCDataset
```

```{eval-rst}
.. autosummary::
:toctree: generated/

types.ReduceFunc
```

<!-- these are types, not classes, so don’t use the above template -->

```{eval-rst}
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2 changes: 1 addition & 1 deletion docs/release-notes/0.6.0.md
Original file line number Diff line number Diff line change
Expand Up @@ -2,7 +2,7 @@
### 0.6.0 {small}`1 May, 2018`

- compatibility with Seurat converter
- tremendous speedup for {meth}`~anndata.AnnData.concatenate`
- tremendous speedup for `~anndata.AnnData.concatenate`
- bug fix for deep copy of unstructured annotation after slicing
- bug fix for reading HDF5 stored single-category annotations
- `'outer join'` concatenation: adds zeros for concatenation of sparse data and nans for dense data
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2 changes: 1 addition & 1 deletion docs/release-notes/0.9.0.md
Original file line number Diff line number Diff line change
Expand Up @@ -39,7 +39,7 @@

#### Deprecations

- {meth}`AnnData.concatenate() <anndata.AnnData.concatenate>` is now deprecated in favour of {func}`anndata.concat` {pr}`845` {user}`ivirshup`
- `AnnData.concatenate()` is now deprecated in favour of {func}`anndata.concat` {pr}`845` {user}`ivirshup`

#### Bug fixes

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1 change: 1 addition & 0 deletions docs/release-notes/2367.breaking.md
Original file line number Diff line number Diff line change
@@ -0,0 +1 @@
Remove `Anndata.__{set,del}item__` {user}`ilan-gold`
1 change: 1 addition & 0 deletions docs/release-notes/2370.breaking.md
Original file line number Diff line number Diff line change
@@ -0,0 +1 @@
Remove `AnnData.concatenate` {user}`ilan-gold`
1 change: 1 addition & 0 deletions docs/release-notes/2372.feat.md
Original file line number Diff line number Diff line change
@@ -0,0 +1 @@
New {meth}`AnnData.reduce` for crawling the "elems" and accumulating a value over these, and then {meth}`AnnData.can_write` built on top {user}`ilan-gold`
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