Snakemake pipeline to analyze transposable element 'omics data.
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Updated
Aug 3, 2026 - R
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retrotransposon
Here are 3 public repositories matching this topic...
Evidence-traceable Windows desktop app for transposable-element (TE) annotation and TE-aware, genome-validated PCR primer design. Native PySide6/Qt, offline scientific core, optional one-click Dfam/RepeatMasker + minimap2 backend.
desktop-app windows bioinformatics genomics pcr molecular-biology hmmer transposable-elements primer-design sequence-analysis repeatmasker primer3 dfam pyside6 retrotransposon
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Aug 7, 2026 - Python
Code to replicate the results of "Retrotransposon Expression Is Upregulated in Adulthood and Suppressed during Regeneration of the Limb in the Axolotl (Ambystoma mexicanum)" (Ruiz-Pérez et al., 2025)
development bioinformatics genomics axolotl aging regeneration limb retrotransposon blastema repetitive-element
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Updated
Jul 6, 2025 - Shell
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