weigertlab

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1. trackastra trackastra Public

   Transformer-based cell tracking for live-cell microscopy

   Python 147 32

2. spotiflow spotiflow Public

   Accurate and efficient spot detection for microscopy data

   Python 139 21

3. muvit muvit Public

   Official implementation of MuViT (CVPR 2026), a ViT-based architecture for multi-scale modelling of gigapixel microscopy images.

   Python 45 5

4. tarrow tarrow Public

   Time arrow prediction for live-cell microscopy

   Python 22 7

5. napari-spotiflow napari-spotiflow Public

   Spotiflow plugin for napari

   Python 19 1

6. napari-trackastra napari-trackastra Public

   napari plugin for trackastra

   Python 19 3